Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
Gm3854A0A1B0GSS6 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Gm3854A0A1B0GSS6 Rps24-207ENSMUST00000224568 714 ntBASIC22.56■■□□□ 1.2
Gm3854A0A1B0GSS6 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Gm3854A0A1B0GSS6 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Gm3854A0A1B0GSS6 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
Gm3854A0A1B0GSS6 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm3854A0A1B0GSS6 Gm15039-201ENSMUST00000118914 875 ntBASIC22.54■■□□□ 1.2
Gm3854A0A1B0GSS6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm3854A0A1B0GSS6 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC22.54■■□□□ 1.2
Gm3854A0A1B0GSS6 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm3854A0A1B0GSS6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Gm3854A0A1B0GSS6 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Gm3854A0A1B0GSS6 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Gm3854A0A1B0GSS6 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Gm3854A0A1B0GSS6 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Gm3854A0A1B0GSS6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
Gm3854A0A1B0GSS6 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Gm3854A0A1B0GSS6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Gm3854A0A1B0GSS6 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm3854A0A1B0GSS6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC22.51■■□□□ 1.19
Gm3854A0A1B0GSS6 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Gm3854A0A1B0GSS6 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm3854A0A1B0GSS6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
Gm3854A0A1B0GSS6 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC22.5■■□□□ 1.19
Gm3854A0A1B0GSS6 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.5■■□□□ 1.19
Gm3854A0A1B0GSS6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Gm3854A0A1B0GSS6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Gm3854A0A1B0GSS6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.49■■□□□ 1.19
Gm3854A0A1B0GSS6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Gm3854A0A1B0GSS6 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
Gm3854A0A1B0GSS6 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Gm3854A0A1B0GSS6 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm3854A0A1B0GSS6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm3854A0A1B0GSS6 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm3854A0A1B0GSS6 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.48■■□□□ 1.19
Gm3854A0A1B0GSS6 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Gm3854A0A1B0GSS6 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC22.48■■□□□ 1.19
Gm3854A0A1B0GSS6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Gm3854A0A1B0GSS6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC22.47■■□□□ 1.19
Gm3854A0A1B0GSS6 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC22.47■■□□□ 1.19
Gm3854A0A1B0GSS6 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Gm3854A0A1B0GSS6 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.47■■□□□ 1.19
Gm3854A0A1B0GSS6 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Gm3854A0A1B0GSS6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Gm3854A0A1B0GSS6 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Gm3854A0A1B0GSS6 Gm42501-201ENSMUST00000200220 1026 ntBASIC22.46■■□□□ 1.19
Gm3854A0A1B0GSS6 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Gm3854A0A1B0GSS6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
Gm3854A0A1B0GSS6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC22.46■■□□□ 1.19
Gm3854A0A1B0GSS6 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
Gm3854A0A1B0GSS6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
Gm3854A0A1B0GSS6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm3854A0A1B0GSS6 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
Gm3854A0A1B0GSS6 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm3854A0A1B0GSS6 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.45■■□□□ 1.18
Gm3854A0A1B0GSS6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Gm3854A0A1B0GSS6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Gm3854A0A1B0GSS6 Gm14117-201ENSMUST00000122417 843 ntBASIC22.44■■□□□ 1.18
Gm3854A0A1B0GSS6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Gm3854A0A1B0GSS6 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Gm3854A0A1B0GSS6 Gm45102-201ENSMUST00000207427 857 ntBASIC22.44■■□□□ 1.18
Gm3854A0A1B0GSS6 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3854A0A1B0GSS6 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3854A0A1B0GSS6 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3854A0A1B0GSS6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.43■■□□□ 1.18
Gm3854A0A1B0GSS6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
Gm3854A0A1B0GSS6 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Gm3854A0A1B0GSS6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Gm3854A0A1B0GSS6 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm3854A0A1B0GSS6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm3854A0A1B0GSS6 Gm18755-201ENSMUST00000218030 1099 ntBASIC22.41■■□□□ 1.18
Gm3854A0A1B0GSS6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Gm3854A0A1B0GSS6 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Gm3854A0A1B0GSS6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gm3854A0A1B0GSS6 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC22.39■■□□□ 1.17
Gm3854A0A1B0GSS6 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm3854A0A1B0GSS6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm3854A0A1B0GSS6 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3854A0A1B0GSS6 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3854A0A1B0GSS6 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Gm3854A0A1B0GSS6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3854A0A1B0GSS6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3854A0A1B0GSS6 Gm9959-201ENSMUST00000068277 390 ntBASIC22.38■■□□□ 1.17
Gm3854A0A1B0GSS6 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3854A0A1B0GSS6 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm3854A0A1B0GSS6 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm3854A0A1B0GSS6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm3854A0A1B0GSS6 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.37■■□□□ 1.17
Gm3854A0A1B0GSS6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm3854A0A1B0GSS6 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3854A0A1B0GSS6 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.36■■□□□ 1.17
Gm3854A0A1B0GSS6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3854A0A1B0GSS6 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3854A0A1B0GSS6 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.36■■□□□ 1.17
Gm3854A0A1B0GSS6 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Gm3854A0A1B0GSS6 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC22.36■■□□□ 1.17
Gm3854A0A1B0GSS6 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.36■■□□□ 1.17
Gm3854A0A1B0GSS6 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Gm3854A0A1B0GSS6 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 118.4 ms