Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdv2-1A0A0G2JGB9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC16.34■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Gm42699-201ENSMUST00000198104 1657 ntBASIC16.34■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Trdv2-1A0A0G2JGB9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv2-1A0A0G2JGB9 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC16.32■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdv2-1A0A0G2JGB9 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC16.32■□□□□ 0.2
Trdv2-1A0A0G2JGB9 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.32■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.29■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv2-1A0A0G2JGB9 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Gm24804-201ENSMUST00000174982 85 ntBASIC16.27■□□□□ 0.2
Trdv2-1A0A0G2JGB9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trdv2-1A0A0G2JGB9 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC16.26■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC16.26■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trdv2-1A0A0G2JGB9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.24■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC16.23■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.23■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC16.22■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trdv2-1A0A0G2JGB9 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms