Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC15.29■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC15.28■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav13d-4A0A0G2JFX3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.28■□□□□ 0.04
Trav13d-4A0A0G2JFX3 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC15.27■□□□□ 0.04
Trav13d-4A0A0G2JFX3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav13d-4A0A0G2JFX3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.25■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Gm42809-201ENSMUST00000198429 1138 ntBASIC15.24■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Gm37136-201ENSMUST00000194368 194 ntBASIC15.23■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC15.23■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trav13d-4A0A0G2JFX3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Trav13d-4A0A0G2JFX3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav13d-4A0A0G2JFX3 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.19■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-4A0A0G2JFX3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-4A0A0G2JFX3 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav13d-4A0A0G2JFX3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms