Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv12-2A0A0B4J1H1 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.68■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.68■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Gm9397-201ENSMUST00000200125 605 ntBASIC17.68■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv12-2A0A0B4J1H1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.66■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.66■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Trbv12-2A0A0B4J1H1 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv12-2A0A0B4J1H1 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC17.64■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv12-2A0A0B4J1H1 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC17.62■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC17.62■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Trbv12-2A0A0B4J1H1 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.61■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Trbv12-2A0A0B4J1H1 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.58■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv12-2A0A0B4J1H1 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC17.57■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Trbv12-2A0A0B4J1H1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv12-2A0A0B4J1H1 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv12-2A0A0B4J1H1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv12-2A0A0B4J1H1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Trbv12-2A0A0B4J1H1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Trbv12-2A0A0B4J1H1 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-2A0A0B4J1H1 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Trbv12-2A0A0B4J1H1 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-2A0A0B4J1H1 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Trbv12-2A0A0B4J1H1 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-2A0A0B4J1H1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Trbv12-2A0A0B4J1H1 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms