Protein–RNA interactions for Protein: A0A0A6YXF1

Ighv3-4, Immunoglobulin heavy variable V3-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv3-4A0A0A6YXF1 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Ighv3-4A0A0A6YXF1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC18.7■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC18.7■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.7■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Ighv3-4A0A0A6YXF1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC18.69■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Gm14117-201ENSMUST00000122417 843 ntBASIC18.69■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC18.69■□□□□ 0.58
Ighv3-4A0A0A6YXF1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv3-4A0A0A6YXF1 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ighv3-4A0A0A6YXF1 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv3-4A0A0A6YXF1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv3-4A0A0A6YXF1 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ighv3-4A0A0A6YXF1 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Gm9959-201ENSMUST00000068277 390 ntBASIC18.63■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.62■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv3-4A0A0A6YXF1 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC18.6■□□□□ 0.57
Ighv3-4A0A0A6YXF1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Fezf2-202ENSMUST00000224023 1917 ntBASIC18.6■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Ighv3-4A0A0A6YXF1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ighv3-4A0A0A6YXF1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Gm10232-201ENSMUST00000089221 720 ntBASIC18.57■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Ighv3-4A0A0A6YXF1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18.57■□□□□ 0.56
Ighv3-4A0A0A6YXF1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC18.56■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC18.56■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC18.55■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.55■□□□□ 0.56
Ighv3-4A0A0A6YXF1 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms