Protein–RNA interactions for Protein: A0A0A6YX66

Ighv1-20, Immunoglobulin heavy variable V1-20 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-20A0A0A6YX66 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-20A0A0A6YX66 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Ighv1-20A0A0A6YX66 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC18.06■□□□□ 0.48
Ighv1-20A0A0A6YX66 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ighv1-20A0A0A6YX66 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC18.06■□□□□ 0.48
Ighv1-20A0A0A6YX66 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC18.06■□□□□ 0.48
Ighv1-20A0A0A6YX66 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC18.05■□□□□ 0.48
Ighv1-20A0A0A6YX66 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-20A0A0A6YX66 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Ighv1-20A0A0A6YX66 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Ighv1-20A0A0A6YX66 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ighv1-20A0A0A6YX66 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-20A0A0A6YX66 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-20A0A0A6YX66 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.04■□□□□ 0.48
Ighv1-20A0A0A6YX66 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ighv1-20A0A0A6YX66 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.03■□□□□ 0.48
Ighv1-20A0A0A6YX66 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-20A0A0A6YX66 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-20A0A0A6YX66 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-20A0A0A6YX66 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC18.03■□□□□ 0.48
Ighv1-20A0A0A6YX66 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ighv1-20A0A0A6YX66 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-20A0A0A6YX66 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-20A0A0A6YX66 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-20A0A0A6YX66 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ighv1-20A0A0A6YX66 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-20A0A0A6YX66 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-20A0A0A6YX66 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-20A0A0A6YX66 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-20A0A0A6YX66 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ighv1-20A0A0A6YX66 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ighv1-20A0A0A6YX66 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ighv1-20A0A0A6YX66 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-20A0A0A6YX66 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ighv1-20A0A0A6YX66 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-20A0A0A6YX66 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-20A0A0A6YX66 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-20A0A0A6YX66 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-20A0A0A6YX66 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC18■□□□□ 0.47
Ighv1-20A0A0A6YX66 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-20A0A0A6YX66 AC164433.2-201ENSMUST00000226346 1701 ntBASIC18■□□□□ 0.47
Ighv1-20A0A0A6YX66 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-20A0A0A6YX66 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ighv1-20A0A0A6YX66 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-20A0A0A6YX66 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-20A0A0A6YX66 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-20A0A0A6YX66 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ighv1-20A0A0A6YX66 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC17.98■□□□□ 0.47
Ighv1-20A0A0A6YX66 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Ighv1-20A0A0A6YX66 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-20A0A0A6YX66 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ighv1-20A0A0A6YX66 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.97■□□□□ 0.47
Ighv1-20A0A0A6YX66 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-20A0A0A6YX66 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-20A0A0A6YX66 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-20A0A0A6YX66 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ighv1-20A0A0A6YX66 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-20A0A0A6YX66 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ighv1-20A0A0A6YX66 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-20A0A0A6YX66 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-20A0A0A6YX66 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-20A0A0A6YX66 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC17.96■□□□□ 0.47
Ighv1-20A0A0A6YX66 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-20A0A0A6YX66 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-20A0A0A6YX66 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-20A0A0A6YX66 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-20A0A0A6YX66 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-20A0A0A6YX66 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-20A0A0A6YX66 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ighv1-20A0A0A6YX66 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-20A0A0A6YX66 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-20A0A0A6YX66 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-20A0A0A6YX66 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-20A0A0A6YX66 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-20A0A0A6YX66 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-20A0A0A6YX66 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.94■□□□□ 0.46
Ighv1-20A0A0A6YX66 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-20A0A0A6YX66 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-20A0A0A6YX66 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ighv1-20A0A0A6YX66 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ighv1-20A0A0A6YX66 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-20A0A0A6YX66 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-20A0A0A6YX66 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-20A0A0A6YX66 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ighv1-20A0A0A6YX66 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-20A0A0A6YX66 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Ighv1-20A0A0A6YX66 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Ighv1-20A0A0A6YX66 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-20A0A0A6YX66 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-20A0A0A6YX66 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-20A0A0A6YX66 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-20A0A0A6YX66 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-20A0A0A6YX66 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ighv1-20A0A0A6YX66 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-20A0A0A6YX66 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ighv1-20A0A0A6YX66 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-20A0A0A6YX66 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-20A0A0A6YX66 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ighv1-20A0A0A6YX66 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.89■□□□□ 0.46
Ighv1-20A0A0A6YX66 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms