Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16A0A075B653 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16A0A075B653 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Trav16A0A075B653 Gm14121-201ENSMUST00000121441 1380 ntBASIC17.18■□□□□ 0.34
Trav16A0A075B653 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16A0A075B653 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16A0A075B653 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.18■□□□□ 0.34
Trav16A0A075B653 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16A0A075B653 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16A0A075B653 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trav16A0A075B653 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Trav16A0A075B653 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16A0A075B653 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16A0A075B653 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16A0A075B653 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trav16A0A075B653 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16A0A075B653 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16A0A075B653 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC17.16■□□□□ 0.34
Trav16A0A075B653 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC17.16■□□□□ 0.34
Trav16A0A075B653 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16A0A075B653 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16A0A075B653 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16A0A075B653 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav16A0A075B653 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16A0A075B653 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16A0A075B653 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16A0A075B653 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Trav16A0A075B653 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trav16A0A075B653 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16A0A075B653 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16A0A075B653 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav16A0A075B653 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav16A0A075B653 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav16A0A075B653 Notumos-201ENSMUST00000151998 2659 ntBASIC17.14■□□□□ 0.33
Trav16A0A075B653 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.14■□□□□ 0.33
Trav16A0A075B653 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav16A0A075B653 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16A0A075B653 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16A0A075B653 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trav16A0A075B653 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16A0A075B653 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16A0A075B653 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16A0A075B653 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav16A0A075B653 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16A0A075B653 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16A0A075B653 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16A0A075B653 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav16A0A075B653 Gm4419-202ENSMUST00000226239 1431 ntBASIC17.12■□□□□ 0.33
Trav16A0A075B653 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Trav16A0A075B653 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.12■□□□□ 0.33
Trav16A0A075B653 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16A0A075B653 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16A0A075B653 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16A0A075B653 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Trav16A0A075B653 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16A0A075B653 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16A0A075B653 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Trav16A0A075B653 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16A0A075B653 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16A0A075B653 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav16A0A075B653 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16A0A075B653 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16A0A075B653 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav16A0A075B653 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Trav16A0A075B653 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Trav16A0A075B653 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16A0A075B653 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16A0A075B653 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC17.1■□□□□ 0.33
Trav16A0A075B653 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav16A0A075B653 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav16A0A075B653 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav16A0A075B653 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav16A0A075B653 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav16A0A075B653 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav16A0A075B653 Tdp2-203ENSMUST00000223804 1136 ntBASIC17.09■□□□□ 0.33
Trav16A0A075B653 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav16A0A075B653 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav16A0A075B653 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav16A0A075B653 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav16A0A075B653 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav16A0A075B653 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav16A0A075B653 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav16A0A075B653 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav16A0A075B653 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
Trav16A0A075B653 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav16A0A075B653 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav16A0A075B653 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Trav16A0A075B653 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Trav16A0A075B653 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16A0A075B653 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16A0A075B653 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav16A0A075B653 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16A0A075B653 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16A0A075B653 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
Trav16A0A075B653 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16A0A075B653 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16A0A075B653 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16A0A075B653 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav16A0A075B653 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav16A0A075B653 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms