Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav1A0A075B5Z4 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav1A0A075B5Z4 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav1A0A075B5Z4 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav1A0A075B5Z4 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Trav1A0A075B5Z4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav1A0A075B5Z4 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.81■□□□□ 0.92
Trav1A0A075B5Z4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Trav1A0A075B5Z4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav1A0A075B5Z4 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.8■□□□□ 0.92
Trav1A0A075B5Z4 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav1A0A075B5Z4 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trav1A0A075B5Z4 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
Trav1A0A075B5Z4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Trav1A0A075B5Z4 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav1A0A075B5Z4 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Trav1A0A075B5Z4 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Trav1A0A075B5Z4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Trav1A0A075B5Z4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav1A0A075B5Z4 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Trav1A0A075B5Z4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav1A0A075B5Z4 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Trav1A0A075B5Z4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav1A0A075B5Z4 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Trav1A0A075B5Z4 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav1A0A075B5Z4 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
Trav1A0A075B5Z4 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav1A0A075B5Z4 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav1A0A075B5Z4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.77■□□□□ 0.92
Trav1A0A075B5Z4 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Trav1A0A075B5Z4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav1A0A075B5Z4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav1A0A075B5Z4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Trav1A0A075B5Z4 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.76■□□□□ 0.91
Trav1A0A075B5Z4 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav1A0A075B5Z4 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav1A0A075B5Z4 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav1A0A075B5Z4 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav1A0A075B5Z4 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Trav1A0A075B5Z4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav1A0A075B5Z4 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav1A0A075B5Z4 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav1A0A075B5Z4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav1A0A075B5Z4 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav1A0A075B5Z4 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Trav1A0A075B5Z4 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav1A0A075B5Z4 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav1A0A075B5Z4 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav1A0A075B5Z4 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Trav1A0A075B5Z4 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav1A0A075B5Z4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Trav1A0A075B5Z4 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav1A0A075B5Z4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Trav1A0A075B5Z4 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.74■□□□□ 0.91
Trav1A0A075B5Z4 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Trav1A0A075B5Z4 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav1A0A075B5Z4 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav1A0A075B5Z4 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav1A0A075B5Z4 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Trav1A0A075B5Z4 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav1A0A075B5Z4 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav1A0A075B5Z4 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Trav1A0A075B5Z4 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.72■□□□□ 0.91
Trav1A0A075B5Z4 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.72■□□□□ 0.91
Trav1A0A075B5Z4 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav1A0A075B5Z4 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav1A0A075B5Z4 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav1A0A075B5Z4 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav1A0A075B5Z4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trav1A0A075B5Z4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Trav1A0A075B5Z4 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC20.7■□□□□ 0.9
Trav1A0A075B5Z4 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Trav1A0A075B5Z4 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav1A0A075B5Z4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav1A0A075B5Z4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav1A0A075B5Z4 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav1A0A075B5Z4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav1A0A075B5Z4 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC20.69■□□□□ 0.9
Trav1A0A075B5Z4 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav1A0A075B5Z4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav1A0A075B5Z4 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav1A0A075B5Z4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.68■□□□□ 0.9
Trav1A0A075B5Z4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.68■□□□□ 0.9
Trav1A0A075B5Z4 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav1A0A075B5Z4 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trav1A0A075B5Z4 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav1A0A075B5Z4 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav1A0A075B5Z4 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav1A0A075B5Z4 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Trav1A0A075B5Z4 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Trav1A0A075B5Z4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.67■□□□□ 0.9
Trav1A0A075B5Z4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav1A0A075B5Z4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav1A0A075B5Z4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav1A0A075B5Z4 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav1A0A075B5Z4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav1A0A075B5Z4 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Trav1A0A075B5Z4 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav1A0A075B5Z4 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav1A0A075B5Z4 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms