Protein–RNA interactions for Protein: Q9P003

CNIH4, Protein cornichon homolog 4, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4Q9P003 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.69■□□□□ 0.26
CNIH4Q9P003 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CNIH4Q9P003 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CNIH4Q9P003 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CNIH4Q9P003 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.69■□□□□ 0.26
CNIH4Q9P003 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.69■□□□□ 0.26
CNIH4Q9P003 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.69■□□□□ 0.26
CNIH4Q9P003 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC16.69■□□□□ 0.26
CNIH4Q9P003 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CNIH4Q9P003 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC16.69■□□□□ 0.26
CNIH4Q9P003 AL024508.2-201ENST00000607749 1894 ntBASIC16.69■□□□□ 0.26
CNIH4Q9P003 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNIH4Q9P003 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 AC012317.2-201ENST00000623305 2251 ntBASIC16.68■□□□□ 0.26
CNIH4Q9P003 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 AL353692.3-201ENST00000407031 1396 ntBASIC16.68■□□□□ 0.26
CNIH4Q9P003 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 GUSBP12-201ENST00000513727 720 ntBASIC16.68■□□□□ 0.26
CNIH4Q9P003 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 UBC-206ENST00000538617 1303 ntTSL 5 BASIC16.68■□□□□ 0.26
CNIH4Q9P003 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CNIH4Q9P003 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.67■□□□□ 0.26
CNIH4Q9P003 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.67■□□□□ 0.26
CNIH4Q9P003 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.67■□□□□ 0.26
CNIH4Q9P003 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.67■□□□□ 0.26
CNIH4Q9P003 NPAP1P7-201ENST00000613027 823 ntBASIC16.67■□□□□ 0.26
CNIH4Q9P003 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.67■□□□□ 0.26
CNIH4Q9P003 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.67■□□□□ 0.26
CNIH4Q9P003 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CNIH4Q9P003 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CNIH4Q9P003 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CNIH4Q9P003 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms