Protein–RNA interactions for Protein: Q9CUB6

Otud1, OTU domain-containing protein 1, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud1Q9CUB6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 AC166341.4-201ENSMUST00000220625 123 ntBASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
Otud1Q9CUB6 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Nudt18-203ENSMUST00000228768 1578 ntBASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Gm43474-201ENSMUST00000196415 774 ntBASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Gm43125-201ENSMUST00000201724 730 ntBASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Gm18057-201ENSMUST00000208220 503 ntBASIC14.06□□□□□ -0.16
Otud1Q9CUB6 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Otud1Q9CUB6 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Gm12017-201ENSMUST00000122453 1003 ntBASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
Otud1Q9CUB6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms