Protein–RNA interactions for Protein: Q99LM3

Smtnl1, Smoothelin-like protein 1, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smtnl1Q99LM3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Smtnl1Q99LM3 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.32■□□□□ 0.2
Smtnl1Q99LM3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Smtnl1Q99LM3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
Smtnl1Q99LM3 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smtnl1Q99LM3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smtnl1Q99LM3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smtnl1Q99LM3 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Smtnl1Q99LM3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smtnl1Q99LM3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Smtnl1Q99LM3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Gm7230-201ENSMUST00000173026 815 ntBASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Smtnl1Q99LM3 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Gm9103-201ENSMUST00000119371 405 ntBASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Ap5m1-205ENSMUST00000227431 3757 ntBASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Smtnl1Q99LM3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Smtnl1Q99LM3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smtnl1Q99LM3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smtnl1Q99LM3 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smtnl1Q99LM3 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smtnl1Q99LM3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smtnl1Q99LM3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Smtnl1Q99LM3 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Smtnl1Q99LM3 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms