Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rab40bQ8VHP8 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rab40bQ8VHP8 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Rab40bQ8VHP8 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Rab40bQ8VHP8 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Rab40bQ8VHP8 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Rab40bQ8VHP8 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Rab40bQ8VHP8 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rab40bQ8VHP8 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Rab40bQ8VHP8 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Rab40bQ8VHP8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Gm10499-201ENSMUST00000174094 934 ntBASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rab40bQ8VHP8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rab40bQ8VHP8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms