Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Gm29361-201ENSMUST00000183323 2000 ntBASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Tmc1Q8R4P5 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Gm18206-201ENSMUST00000207027 926 ntBASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tmc1Q8R4P5 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Gm18856-201ENSMUST00000178096 1374 ntBASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Gm12497-201ENSMUST00000138778 237 ntBASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tmc1Q8R4P5 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC18.18■□□□□ 0.5
Tmc1Q8R4P5 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmc1Q8R4P5 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmc1Q8R4P5 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmc1Q8R4P5 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Tmc1Q8R4P5 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC18.17■□□□□ 0.5
Tmc1Q8R4P5 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tmc1Q8R4P5 AC138767.1-201ENSMUST00000222661 415 ntBASIC18.17■□□□□ 0.5
Tmc1Q8R4P5 Rbfox2-207ENSMUST00000227533 1041 ntBASIC18.17■□□□□ 0.5
Tmc1Q8R4P5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Tmc1Q8R4P5 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms