Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcll1Q8JZS7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcll1Q8JZS7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcll1Q8JZS7 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.31■□□□□ 0.04
Hmgcll1Q8JZS7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hmgcll1Q8JZS7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Gm15693-201ENSMUST00000120470 637 ntBASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Gm9824-201ENSMUST00000178707 561 ntBASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Gm6944-201ENSMUST00000182449 1006 ntBASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Gm8116-201ENSMUST00000182917 1201 ntBASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hmgcll1Q8JZS7 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 AA543401-201ENSMUST00000164248 1269 ntBASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Gm27430-201ENSMUST00000184585 107 ntBASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Gm29541-201ENSMUST00000191351 678 ntBASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Gm44333-201ENSMUST00000197168 107 ntBASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 AC158529.1-201ENSMUST00000223618 239 ntBASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Hmgcll1Q8JZS7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Ighv8-7-201ENSMUST00000194349 297 ntBASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Gm18049-201ENSMUST00000208909 581 ntBASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Hmgcll1Q8JZS7 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcll1Q8JZS7 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcll1Q8JZS7 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Hmgcll1Q8JZS7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Hmgcll1Q8JZS7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms