Protein–RNA interactions for Protein: Q5ND28

Scarf1, Scavenger receptor class F member 1, mousemouse

Predictions only

Length 820 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarf1Q5ND28 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Scarf1Q5ND28 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 AC164565.1-201ENSMUST00000217520 1484 ntBASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Trav13-3-201ENSMUST00000117226 336 ntBASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Ifnb1-201ENSMUST00000055671 750 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Scarf1Q5ND28 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Gm44711-201ENSMUST00000205414 1264 ntBASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Sybu-209ENSMUST00000228639 4113 ntBASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Scarf1Q5ND28 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 EU599041-202ENSMUST00000205291 1386 ntTSL 5 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Gm13464-201ENSMUST00000119418 935 ntBASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Mir1895-201ENSMUST00000122615 79 ntBASIC16.29■□□□□ 0.2
Scarf1Q5ND28 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 AC166341.4-201ENSMUST00000220625 123 ntBASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Msmb-201ENSMUST00000022464 562 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Scarf1Q5ND28 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms