Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.71■□□□□ 0.11
SOX2P48431 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SOX2P48431 AC113410.3-201ENST00000623366 203 ntBASIC15.71■□□□□ 0.11
SOX2P48431 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.71■□□□□ 0.11
SOX2P48431 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.71■□□□□ 0.11
SOX2P48431 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC15.71■□□□□ 0.11
SOX2P48431 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SOX2P48431 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.71■□□□□ 0.11
SOX2P48431 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SOX2P48431 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SOX2P48431 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SOX2P48431 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SOX2P48431 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
SOX2P48431 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.71■□□□□ 0.1
SOX2P48431 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SOX2P48431 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
SOX2P48431 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.71■□□□□ 0.1
SOX2P48431 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SOX2P48431 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SOX2P48431 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SOX2P48431 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 ABHD17AP1-201ENST00000358206 933 ntBASIC15.7■□□□□ 0.1
SOX2P48431 HIST1H2APS4-201ENST00000362070 348 ntBASIC15.7■□□□□ 0.1
SOX2P48431 PENK-204ENST00000518770 863 ntTSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.7■□□□□ 0.1
SOX2P48431 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC15.7■□□□□ 0.1
SOX2P48431 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC15.7■□□□□ 0.1
SOX2P48431 WWOX-216ENST00000569818 525 ntBASIC15.7■□□□□ 0.1
SOX2P48431 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.7■□□□□ 0.1
SOX2P48431 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SOX2P48431 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SOX2P48431 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SOX2P48431 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SOX2P48431 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SOX2P48431 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SOX2P48431 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.69■□□□□ 0.1
SOX2P48431 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
SOX2P48431 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.69■□□□□ 0.1
SOX2P48431 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.69■□□□□ 0.1
SOX2P48431 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.69■□□□□ 0.1
SOX2P48431 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
SOX2P48431 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SOX2P48431 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.69■□□□□ 0.1
SOX2P48431 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC15.69■□□□□ 0.1
SOX2P48431 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SOX2P48431 RPS2P55-201ENST00000397318 883 ntBASIC15.69■□□□□ 0.1
SOX2P48431 AC107956.1-201ENST00000494359 873 ntBASIC15.69■□□□□ 0.1
SOX2P48431 DUTP2-201ENST00000519164 463 ntBASIC15.69■□□□□ 0.1
SOX2P48431 REXO2-216ENST00000544196 452 ntTSL 3 BASIC15.69■□□□□ 0.1
SOX2P48431 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC15.69■□□□□ 0.1
SOX2P48431 AL353719.1-201ENST00000566847 864 ntBASIC15.69■□□□□ 0.1
SOX2P48431 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.69■□□□□ 0.1
SOX2P48431 AL023803.3-201ENST00000615559 522 ntBASIC15.69■□□□□ 0.1
SOX2P48431 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
SOX2P48431 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SOX2P48431 AL138688.1-201ENST00000624851 1594 ntBASIC15.69■□□□□ 0.1
SOX2P48431 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
SOX2P48431 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms