Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.86■□□□□ 0.29
NCK1P16333 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
NCK1P16333 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC16.86■□□□□ 0.29
NCK1P16333 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.86■□□□□ 0.29
NCK1P16333 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.86■□□□□ 0.29
NCK1P16333 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.86■□□□□ 0.29
NCK1P16333 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NCK1P16333 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC16.86■□□□□ 0.29
NCK1P16333 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
NCK1P16333 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.86■□□□□ 0.29
NCK1P16333 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NCK1P16333 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.86■□□□□ 0.29
NCK1P16333 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NCK1P16333 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.85■□□□□ 0.29
NCK1P16333 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.85■□□□□ 0.29
NCK1P16333 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.85■□□□□ 0.29
NCK1P16333 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
NCK1P16333 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC16.85■□□□□ 0.29
NCK1P16333 NUDT16P1-203ENST00000513809 620 ntBASIC16.85■□□□□ 0.29
NCK1P16333 AP003041.3-201ENST00000527151 707 ntBASIC16.85■□□□□ 0.29
NCK1P16333 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC16.85■□□□□ 0.29
NCK1P16333 AC104390.1-201ENST00000555663 520 ntBASIC16.85■□□□□ 0.29
NCK1P16333 AC009065.1-201ENST00000564055 1225 ntBASIC16.85■□□□□ 0.29
NCK1P16333 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
NCK1P16333 SPIB-206ENST00000596074 847 ntTSL 2 BASIC16.85■□□□□ 0.29
NCK1P16333 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.85■□□□□ 0.29
NCK1P16333 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
NCK1P16333 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NCK1P16333 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.84■□□□□ 0.29
NCK1P16333 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.84■□□□□ 0.29
NCK1P16333 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NCK1P16333 PCDHB19P-201ENST00000570871 2371 ntBASIC16.84■□□□□ 0.29
NCK1P16333 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NCK1P16333 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.84■□□□□ 0.29
NCK1P16333 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.84■□□□□ 0.29
NCK1P16333 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.84■□□□□ 0.29
NCK1P16333 GRAP-204ENST00000573099 846 ntTSL 3 BASIC16.84■□□□□ 0.29
NCK1P16333 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.84■□□□□ 0.29
NCK1P16333 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.84■□□□□ 0.29
NCK1P16333 FAM197Y4-202ENST00000622692 608 ntBASIC16.84■□□□□ 0.29
NCK1P16333 AC112497.1-201ENST00000624824 639 ntBASIC16.84■□□□□ 0.29
NCK1P16333 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
NCK1P16333 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.84■□□□□ 0.29
NCK1P16333 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.84■□□□□ 0.29
NCK1P16333 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.84■□□□□ 0.29
NCK1P16333 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
NCK1P16333 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
NCK1P16333 REXO1L11P-201ENST00000620964 1927 ntBASIC16.84■□□□□ 0.29
NCK1P16333 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 AGGF1P2-201ENST00000426656 2106 ntBASIC16.84■□□□□ 0.29
NCK1P16333 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 OR6D1P-203ENST00000641209 4860 ntBASIC16.84■□□□□ 0.29
NCK1P16333 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
NCK1P16333 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.29
NCK1P16333 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.83■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms