Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
UBL4AP11441 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
UBL4AP11441 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.53■□□□□ 0.24
UBL4AP11441 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.53■□□□□ 0.24
UBL4AP11441 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBL4AP11441 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBL4AP11441 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
UBL4AP11441 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.52■□□□□ 0.24
UBL4AP11441 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.52■□□□□ 0.24
UBL4AP11441 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
UBL4AP11441 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
UBL4AP11441 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBL4AP11441 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBL4AP11441 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBL4AP11441 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.52■□□□□ 0.24
UBL4AP11441 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.52■□□□□ 0.24
UBL4AP11441 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBL4AP11441 FAM210CP-201ENST00000445714 574 ntBASIC16.52■□□□□ 0.24
UBL4AP11441 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC16.52■□□□□ 0.24
UBL4AP11441 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
UBL4AP11441 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.52■□□□□ 0.24
UBL4AP11441 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.52■□□□□ 0.24
UBL4AP11441 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.52■□□□□ 0.24
UBL4AP11441 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.52■□□□□ 0.24
UBL4AP11441 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.52■□□□□ 0.24
UBL4AP11441 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.52■□□□□ 0.24
UBL4AP11441 AC004263.2-201ENST00000617183 678 ntBASIC16.52■□□□□ 0.24
UBL4AP11441 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.52■□□□□ 0.24
UBL4AP11441 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.52■□□□□ 0.24
UBL4AP11441 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
UBL4AP11441 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.52■□□□□ 0.24
UBL4AP11441 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.52■□□□□ 0.24
UBL4AP11441 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
UBL4AP11441 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.23
UBL4AP11441 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.52■□□□□ 0.23
UBL4AP11441 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.52■□□□□ 0.23
UBL4AP11441 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBL4AP11441 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBL4AP11441 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
UBL4AP11441 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
UBL4AP11441 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
UBL4AP11441 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBL4AP11441 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
UBL4AP11441 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
UBL4AP11441 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
UBL4AP11441 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
UBL4AP11441 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 KRT18P55-202ENST00000578578 1546 ntBASIC16.51■□□□□ 0.23
UBL4AP11441 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.51■□□□□ 0.23
UBL4AP11441 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
UBL4AP11441 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.51■□□□□ 0.23
UBL4AP11441 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.51■□□□□ 0.23
UBL4AP11441 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 IGHGP-201ENST00000390555 1178 ntBASIC16.51■□□□□ 0.23
UBL4AP11441 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBL4AP11441 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
UBL4AP11441 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.51■□□□□ 0.23
UBL4AP11441 AL049597.2-201ENST00000565575 961 ntBASIC16.51■□□□□ 0.23
UBL4AP11441 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC16.51■□□□□ 0.23
UBL4AP11441 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.51■□□□□ 0.23
UBL4AP11441 AC083849.1-201ENST00000615227 514 ntBASIC16.51■□□□□ 0.23
UBL4AP11441 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.51■□□□□ 0.23
UBL4AP11441 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.51■□□□□ 0.23
UBL4AP11441 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.51■□□□□ 0.23
UBL4AP11441 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
UBL4AP11441 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.51■□□□□ 0.23
UBL4AP11441 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBL4AP11441 AC068880.1-201ENST00000507289 2297 ntBASIC16.5■□□□□ 0.23
UBL4AP11441 AC084018.2-201ENST00000613093 2607 ntBASIC16.5■□□□□ 0.23
UBL4AP11441 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
UBL4AP11441 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
UBL4AP11441 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBL4AP11441 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms