Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC15.67■□□□□ 0.1
UBCP0CG48 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBCP0CG48 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBCP0CG48 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBCP0CG48 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
UBCP0CG48 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC15.66■□□□□ 0.1
UBCP0CG48 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBCP0CG48 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.66■□□□□ 0.1
UBCP0CG48 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBCP0CG48 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
UBCP0CG48 AP000523.1-201ENST00000398242 1049 ntBASIC15.66■□□□□ 0.1
UBCP0CG48 MIR3917-201ENST00000580971 93 ntBASIC15.66■□□□□ 0.1
UBCP0CG48 SNX21-213ENST00000614929 587 ntTSL 5 BASIC15.66■□□□□ 0.1
UBCP0CG48 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBCP0CG48 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC15.66■□□□□ 0.1
UBCP0CG48 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBCP0CG48 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBCP0CG48 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC15.66■□□□□ 0.1
UBCP0CG48 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
UBCP0CG48 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBCP0CG48 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
UBCP0CG48 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBCP0CG48 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBCP0CG48 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBCP0CG48 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBCP0CG48 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBCP0CG48 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
UBCP0CG48 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
UBCP0CG48 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.65■□□□□ 0.1
UBCP0CG48 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBCP0CG48 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.65■□□□□ 0.1
UBCP0CG48 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.65■□□□□ 0.1
UBCP0CG48 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.65■□□□□ 0.1
UBCP0CG48 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC15.65■□□□□ 0.1
UBCP0CG48 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
UBCP0CG48 LINC00167-201ENST00000530583 1419 ntBASIC15.65■□□□□ 0.1
UBCP0CG48 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 AD000864.1-201ENST00000624076 2295 ntBASIC15.65■□□□□ 0.1
UBCP0CG48 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.65■□□□□ 0.1
UBCP0CG48 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.65■□□□□ 0.1
UBCP0CG48 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.65■□□□□ 0.1
UBCP0CG48 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBCP0CG48 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
UBCP0CG48 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC15.64■□□□□ 0.1
UBCP0CG48 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
UBCP0CG48 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 PVRIG2P-201ENST00000435460 978 ntBASIC15.64■□□□□ 0.09
UBCP0CG48 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.64■□□□□ 0.09
UBCP0CG48 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
UBCP0CG48 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBCP0CG48 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC15.64■□□□□ 0.09
UBCP0CG48 AL355075.4-201ENST00000554988 638 ntBASIC15.64■□□□□ 0.09
UBCP0CG48 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.64■□□□□ 0.09
UBCP0CG48 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms