Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
P04213 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04213 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04213 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04213 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04213 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04213 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04213 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04213 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
P04213 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
P04213 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
P04213 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
P04213 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.28□□□□□ -0.12
P04213 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.28□□□□□ -0.12
P04213 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.28□□□□□ -0.12
P04213 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
P04213 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.28□□□□□ -0.12
P04213 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Gm13597-201ENSMUST00000121239 375 ntBASIC14.28□□□□□ -0.12
P04213 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
P04213 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.28□□□□□ -0.12
P04213 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
P04213 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.28□□□□□ -0.12
P04213 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.28□□□□□ -0.12
P04213 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
P04213 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
P04213 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P04213 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P04213 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
P04213 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.27□□□□□ -0.13
P04213 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P04213 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.27□□□□□ -0.13
P04213 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P04213 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P04213 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.27□□□□□ -0.13
P04213 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.27□□□□□ -0.13
P04213 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P04213 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
P04213 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
P04213 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
P04213 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
P04213 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P04213 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
P04213 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P04213 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.26□□□□□ -0.13
P04213 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P04213 Mir5126-201ENSMUST00000175513 77 ntBASIC14.26□□□□□ -0.13
P04213 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.26□□□□□ -0.13
P04213 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
P04213 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
P04213 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms