Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Trove2O08848 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trove2O08848 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trove2O08848 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Gm21451-201ENSMUST00000111062 2775 ntBASIC15.31■□□□□ 0.04
Trove2O08848 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trove2O08848 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trove2O08848 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trove2O08848 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trove2O08848 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC15.31■□□□□ 0.04
Trove2O08848 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC15.31■□□□□ 0.04
Trove2O08848 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.31■□□□□ 0.04
Trove2O08848 Gm15165-201ENSMUST00000118140 502 ntBASIC15.31■□□□□ 0.04
Trove2O08848 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trove2O08848 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trove2O08848 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trove2O08848 Gm8349-201ENSMUST00000182720 1003 ntBASIC15.31■□□□□ 0.04
Trove2O08848 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.31■□□□□ 0.04
Trove2O08848 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Trove2O08848 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Trove2O08848 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC15.31■□□□□ 0.04
Trove2O08848 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC15.31■□□□□ 0.04
Trove2O08848 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trove2O08848 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Trove2O08848 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC15.3■□□□□ 0.04
Trove2O08848 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.3■□□□□ 0.04
Trove2O08848 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trove2O08848 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Gm17807-201ENSMUST00000186869 298 ntBASIC15.3■□□□□ 0.04
Trove2O08848 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Trove2O08848 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.3■□□□□ 0.04
Trove2O08848 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.3■□□□□ 0.04
Trove2O08848 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trove2O08848 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Trove2O08848 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Trove2O08848 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trove2O08848 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trove2O08848 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Gm38577-201ENSMUST00000221531 4545 ntBASIC15.29■□□□□ 0.04
Trove2O08848 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Gm9172-201ENSMUST00000212092 954 ntBASIC15.29■□□□□ 0.04
Trove2O08848 AC124569.2-201ENSMUST00000225998 818 ntBASIC15.29■□□□□ 0.04
Trove2O08848 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trove2O08848 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC15.29■□□□□ 0.04
Trove2O08848 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Trove2O08848 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trove2O08848 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trove2O08848 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms