Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.18■□□□□ 0.34
SLC28A1O00337 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A1O00337 AL596275.1-201ENST00000423464 877 ntBASIC17.18■□□□□ 0.34
SLC28A1O00337 LIN28AP1-201ENST00000429574 405 ntBASIC17.18■□□□□ 0.34
SLC28A1O00337 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.18■□□□□ 0.34
SLC28A1O00337 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SLC28A1O00337 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A1O00337 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A1O00337 AL136038.4-201ENST00000603606 1261 ntBASIC17.18■□□□□ 0.34
SLC28A1O00337 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SLC28A1O00337 AL023973.1-201ENST00000624619 620 ntBASIC17.18■□□□□ 0.34
SLC28A1O00337 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A1O00337 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SLC28A1O00337 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A1O00337 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
SLC28A1O00337 AL391807.1-203ENST00000604392 2365 ntBASIC17.18■□□□□ 0.34
SLC28A1O00337 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A1O00337 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A1O00337 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
SLC28A1O00337 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A1O00337 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.18■□□□□ 0.34
SLC28A1O00337 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A1O00337 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A1O00337 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A1O00337 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
SLC28A1O00337 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A1O00337 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SLC28A1O00337 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.18■□□□□ 0.34
SLC28A1O00337 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC28A1O00337 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
SLC28A1O00337 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC28A1O00337 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC28A1O00337 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A1O00337 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC28A1O00337 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
SLC28A1O00337 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A1O00337 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC28A1O00337 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A1O00337 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A1O00337 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC28A1O00337 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC28A1O00337 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A1O00337 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC28A1O00337 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC28A1O00337 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC28A1O00337 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A1O00337 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
SLC28A1O00337 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC28A1O00337 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A1O00337 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC28A1O00337 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC28A1O00337 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC28A1O00337 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC28A1O00337 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC28A1O00337 KRT18P48-201ENST00000434763 852 ntBASIC17.16■□□□□ 0.34
SLC28A1O00337 SLC25A3P1-201ENST00000443844 931 ntBASIC17.16■□□□□ 0.34
SLC28A1O00337 ATP5G1P1-201ENST00000448724 379 ntBASIC17.16■□□□□ 0.34
SLC28A1O00337 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC28A1O00337 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC28A1O00337 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC28A1O00337 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC28A1O00337 AC079602.3-201ENST00000623931 403 ntBASIC17.16■□□□□ 0.34
SLC28A1O00337 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC28A1O00337 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
SLC28A1O00337 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC28A1O00337 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC28A1O00337 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC28A1O00337 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
SLC28A1O00337 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC28A1O00337 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC28A1O00337 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC28A1O00337 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC28A1O00337 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC28A1O00337 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.16■□□□□ 0.34
SLC28A1O00337 KRT8P47-201ENST00000604727 1398 ntBASIC17.15■□□□□ 0.34
SLC28A1O00337 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC28A1O00337 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC28A1O00337 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC28A1O00337 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms