Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Mir7036b-201ENSMUST00000184791 63 ntBASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Carlr-201ENSMUST00000181515 2574 ntBASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.08□□□□□ -0.32
Trav13d-3J3QMG8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Gm5177-201ENSMUST00000183092 997 ntBASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Gm2272-201ENSMUST00000194903 582 ntBASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Trav13d-3J3QMG8 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Gm16198-201ENSMUST00000118766 670 ntBASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Trav13d-3J3QMG8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Trav13d-3J3QMG8 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms