Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Pcdh1F7BJK1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 AC108846.1-201ENSMUST00000214531 513 ntBASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Pcdh1F7BJK1 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Pcdh1F7BJK1 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Gm10499-201ENSMUST00000174094 934 ntBASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Gm27357-201ENSMUST00000183754 135 ntBASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
Pcdh1F7BJK1 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh1F7BJK1 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Pcdh1F7BJK1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC13.39□□□□□ -0.27
Pcdh1F7BJK1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms