Protein–RNA interactions for Protein: Q99633

PRPF18, Pre-mRNA-splicing factor 18, humanhuman

Known RBP Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18Q99633 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PRPF18Q99633 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.37■□□□□ 0.37
PRPF18Q99633 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.37■□□□□ 0.37
PRPF18Q99633 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.37■□□□□ 0.37
PRPF18Q99633 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.37■□□□□ 0.37
PRPF18Q99633 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.37■□□□□ 0.37
PRPF18Q99633 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 AP000525.1-201ENST00000608286 694 ntBASIC17.37■□□□□ 0.37
PRPF18Q99633 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.37■□□□□ 0.37
PRPF18Q99633 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
PRPF18Q99633 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
PRPF18Q99633 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.37■□□□□ 0.37
PRPF18Q99633 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 CICP6-201ENST00000457191 2729 ntBASIC17.37■□□□□ 0.37
PRPF18Q99633 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
PRPF18Q99633 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.37■□□□□ 0.37
PRPF18Q99633 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.37■□□□□ 0.37
PRPF18Q99633 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.37■□□□□ 0.37
PRPF18Q99633 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
PRPF18Q99633 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
PRPF18Q99633 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.36■□□□□ 0.37
PRPF18Q99633 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.36■□□□□ 0.37
PRPF18Q99633 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.36■□□□□ 0.37
PRPF18Q99633 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
PRPF18Q99633 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.36■□□□□ 0.37
PRPF18Q99633 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
PRPF18Q99633 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.36■□□□□ 0.37
PRPF18Q99633 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 TSPY7P-201ENST00000431358 1114 ntBASIC17.36■□□□□ 0.37
PRPF18Q99633 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.36■□□□□ 0.37
PRPF18Q99633 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.36■□□□□ 0.37
PRPF18Q99633 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.36■□□□□ 0.37
PRPF18Q99633 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
PRPF18Q99633 AC104390.1-201ENST00000555663 520 ntBASIC17.36■□□□□ 0.37
PRPF18Q99633 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.36■□□□□ 0.37
PRPF18Q99633 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.36■□□□□ 0.37
PRPF18Q99633 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.36■□□□□ 0.37
PRPF18Q99633 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
PRPF18Q99633 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
PRPF18Q99633 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.36■□□□□ 0.37
PRPF18Q99633 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.36■□□□□ 0.37
PRPF18Q99633 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
PRPF18Q99633 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PRPF18Q99633 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.35■□□□□ 0.37
PRPF18Q99633 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
PRPF18Q99633 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.35■□□□□ 0.37
PRPF18Q99633 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.35■□□□□ 0.37
PRPF18Q99633 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRPF18Q99633 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.35■□□□□ 0.37
PRPF18Q99633 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.35■□□□□ 0.37
PRPF18Q99633 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
PRPF18Q99633 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
PRPF18Q99633 MIR1238-201ENST00000408483 83 ntBASIC17.35■□□□□ 0.37
PRPF18Q99633 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
PRPF18Q99633 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
PRPF18Q99633 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 AC007663.1-201ENST00000438948 1240 ntBASIC17.35■□□□□ 0.37
PRPF18Q99633 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
PRPF18Q99633 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms