Protein–RNA interactions for Protein: Q8R5K2

Usp33, Ubiquitin carboxyl-terminal hydrolase 33, mousemouse

Predictions only

Length 909 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp33Q8R5K2 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Gm6473-201ENSMUST00000188572 1210 ntBASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Gm44344-201ENSMUST00000200287 129 ntBASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC17.15■□□□□ 0.34
Usp33Q8R5K2 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Syt7-204ENSMUST00000223586 1344 ntBASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Usp33Q8R5K2 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 AC158529.1-201ENSMUST00000223618 239 ntBASIC17.13■□□□□ 0.33
Usp33Q8R5K2 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Usp33Q8R5K2 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Gm27533-201ENSMUST00000183800 152 ntBASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Gm7775-201ENSMUST00000218871 853 ntBASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Usp33Q8R5K2 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Usp33Q8R5K2 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms