Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam228aQ8CDW1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Fam228aQ8CDW1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Fam228aQ8CDW1 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam228aQ8CDW1 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.7■□□□□ 0.1
Fam228aQ8CDW1 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.7■□□□□ 0.1
Fam228aQ8CDW1 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Fam228aQ8CDW1 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Fam228aQ8CDW1 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Fam228aQ8CDW1 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 AC108846.1-201ENSMUST00000214531 513 ntBASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Gm10313-201ENSMUST00000095320 1002 ntBASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Mxra8os-201ENSMUST00000097740 687 ntBASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Fam228aQ8CDW1 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Fam228aQ8CDW1 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms