Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rc3h1Q4VGL6 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rc3h1Q4VGL6 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Rc3h1Q4VGL6 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Rc3h1Q4VGL6 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Rc3h1Q4VGL6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Gm18737-201ENSMUST00000173594 937 ntBASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Gm38294-201ENSMUST00000192831 381 ntBASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Gm30437-201ENSMUST00000206086 1201 ntBASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Rc3h1Q4VGL6 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rc3h1Q4VGL6 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Gm14780-201ENSMUST00000118387 2737 ntBASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rc3h1Q4VGL6 Ighv8-7-201ENSMUST00000194349 297 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms