Protein–RNA interactions for Protein: P28235

Gja4, Gap junction alpha-4 protein, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gja4P28235 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
Gja4P28235 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Gja4P28235 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Gja4P28235 Gm45098-201ENSMUST00000207179 657 ntBASIC14.85□□□□□ -0.03
Gja4P28235 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Gja4P28235 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Gja4P28235 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Gja4P28235 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.84□□□□□ -0.03
Gja4P28235 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Gja4P28235 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.84□□□□□ -0.03
Gja4P28235 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Gm13464-201ENSMUST00000119418 935 ntBASIC14.84□□□□□ -0.03
Gja4P28235 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.84□□□□□ -0.03
Gja4P28235 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.84□□□□□ -0.03
Gja4P28235 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Gja4P28235 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Gja4P28235 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Gja4P28235 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Gja4P28235 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Gja4P28235 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gja4P28235 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gja4P28235 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gja4P28235 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Gja4P28235 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Gja4P28235 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 AC135669.1-201ENSMUST00000213585 412 ntBASIC14.83□□□□□ -0.04
Gja4P28235 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.83□□□□□ -0.04
Gja4P28235 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.83□□□□□ -0.04
Gja4P28235 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Gja4P28235 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.83□□□□□ -0.04
Gja4P28235 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.83□□□□□ -0.04
Gja4P28235 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gja4P28235 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gja4P28235 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Gja4P28235 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Gja4P28235 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.82□□□□□ -0.04
Gja4P28235 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gja4P28235 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Gja4P28235 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gja4P28235 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Gja4P28235 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gja4P28235 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.82□□□□□ -0.04
Gja4P28235 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Gja4P28235 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Gja4P28235 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms