Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VCLP18206 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
VCLP18206 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.97■□□□□ 0.47
VCLP18206 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
VCLP18206 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
VCLP18206 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
VCLP18206 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
VCLP18206 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.97■□□□□ 0.47
VCLP18206 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
VCLP18206 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.96■□□□□ 0.47
VCLP18206 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 AC134043.2-201ENST00000624206 2238 ntBASIC17.96■□□□□ 0.47
VCLP18206 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VCLP18206 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.96■□□□□ 0.47
VCLP18206 SDHAP2-201ENST00000455183 2001 ntBASIC17.96■□□□□ 0.47
VCLP18206 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VCLP18206 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
VCLP18206 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
VCLP18206 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.96■□□□□ 0.47
VCLP18206 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.96■□□□□ 0.47
VCLP18206 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.96■□□□□ 0.47
VCLP18206 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.96■□□□□ 0.47
VCLP18206 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.96■□□□□ 0.47
VCLP18206 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.96■□□□□ 0.47
VCLP18206 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.96■□□□□ 0.47
VCLP18206 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 UPK3BP1-201ENST00000428678 509 ntBASIC17.96■□□□□ 0.47
VCLP18206 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.96■□□□□ 0.47
VCLP18206 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.96■□□□□ 0.47
VCLP18206 PTK2-216ENST00000519881 863 ntTSL 3 BASIC17.96■□□□□ 0.47
VCLP18206 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.96■□□□□ 0.47
VCLP18206 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.96■□□□□ 0.47
VCLP18206 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.96■□□□□ 0.47
VCLP18206 AC011498.5-201ENST00000592027 486 ntBASIC17.96■□□□□ 0.47
VCLP18206 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.96■□□□□ 0.47
VCLP18206 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.96■□□□□ 0.47
VCLP18206 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
VCLP18206 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
VCLP18206 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.96■□□□□ 0.47
VCLP18206 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
VCLP18206 AC099343.3-201ENST00000605834 2503 ntBASIC17.96■□□□□ 0.47
VCLP18206 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.96■□□□□ 0.46
VCLP18206 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
VCLP18206 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.96■□□□□ 0.46
VCLP18206 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
VCLP18206 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VCLP18206 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.95■□□□□ 0.46
VCLP18206 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.95■□□□□ 0.46
VCLP18206 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.95■□□□□ 0.46
VCLP18206 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.95■□□□□ 0.46
VCLP18206 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VCLP18206 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.95■□□□□ 0.46
VCLP18206 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.95■□□□□ 0.46
VCLP18206 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.95■□□□□ 0.46
VCLP18206 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.95■□□□□ 0.46
VCLP18206 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VCLP18206 NDUFV2-AS1-203ENST00000608008 779 ntBASIC17.95■□□□□ 0.46
VCLP18206 AC069148.1-201ENST00000608741 768 ntBASIC17.95■□□□□ 0.46
VCLP18206 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VCLP18206 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
VCLP18206 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.95■□□□□ 0.46
VCLP18206 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
VCLP18206 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.95■□□□□ 0.46
VCLP18206 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.95■□□□□ 0.46
VCLP18206 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VCLP18206 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
VCLP18206 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.95■□□□□ 0.46
VCLP18206 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
VCLP18206 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms