Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ALPK3Q96L96 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALPK3Q96L96 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ALPK3Q96L96 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ALPK3Q96L96 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ALPK3Q96L96 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.32■□□□□ 0.68
ALPK3Q96L96 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.32■□□□□ 0.68
ALPK3Q96L96 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.32■□□□□ 0.68
ALPK3Q96L96 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 KLF2P3-201ENST00000451977 1087 ntBASIC19.31■□□□□ 0.68
ALPK3Q96L96 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ALPK3Q96L96 HNRNPFP1-201ENST00000391730 1133 ntBASIC19.31■□□□□ 0.68
ALPK3Q96L96 MRPS18AP1-201ENST00000414458 589 ntBASIC19.31■□□□□ 0.68
ALPK3Q96L96 COX5BP8-201ENST00000416911 349 ntBASIC19.31■□□□□ 0.68
ALPK3Q96L96 FAM58DP-201ENST00000428076 619 ntBASIC19.31■□□□□ 0.68
ALPK3Q96L96 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 SPDYE22P-201ENST00000582158 798 ntBASIC19.31■□□□□ 0.68
ALPK3Q96L96 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC19.31■□□□□ 0.68
ALPK3Q96L96 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ALPK3Q96L96 TDG-209ENST00000544861 1387 ntTSL 2 BASIC19.3■□□□□ 0.68
ALPK3Q96L96 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ALPK3Q96L96 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALPK3Q96L96 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.3■□□□□ 0.68
ALPK3Q96L96 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALPK3Q96L96 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALPK3Q96L96 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ALPK3Q96L96 CNN2P2-201ENST00000443536 909 ntBASIC19.3■□□□□ 0.68
ALPK3Q96L96 CNN2P3-201ENST00000450201 906 ntBASIC19.3■□□□□ 0.68
ALPK3Q96L96 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC19.3■□□□□ 0.68
ALPK3Q96L96 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.3■□□□□ 0.68
ALPK3Q96L96 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC19.3■□□□□ 0.68
ALPK3Q96L96 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALPK3Q96L96 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALPK3Q96L96 AL136317.3-201ENST00000618497 906 ntBASIC19.3■□□□□ 0.68
ALPK3Q96L96 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.3■□□□□ 0.68
ALPK3Q96L96 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.3■□□□□ 0.68
ALPK3Q96L96 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALPK3Q96L96 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALPK3Q96L96 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ALPK3Q96L96 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ALPK3Q96L96 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 TREML5P-201ENST00000421694 576 ntBASIC19.29■□□□□ 0.68
ALPK3Q96L96 AC107890.1-201ENST00000422478 521 ntBASIC19.29■□□□□ 0.68
ALPK3Q96L96 AC092580.3-201ENST00000430932 139 ntBASIC19.29■□□□□ 0.68
ALPK3Q96L96 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 AC112191.1-201ENST00000523689 701 ntBASIC19.29■□□□□ 0.68
ALPK3Q96L96 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 AL135744.1-201ENST00000565098 629 ntBASIC19.29■□□□□ 0.68
ALPK3Q96L96 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALPK3Q96L96 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALPK3Q96L96 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALPK3Q96L96 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALPK3Q96L96 AL158211.5-201ENST00000623583 2518 ntBASIC19.29■□□□□ 0.68
ALPK3Q96L96 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALPK3Q96L96 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ALPK3Q96L96 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALPK3Q96L96 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ALPK3Q96L96 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 BAD-207ENST00000544785 525 ntTSL 3 BASIC19.29■□□□□ 0.68
ALPK3Q96L96 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms