Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Rab40bQ8VHP8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rab40bQ8VHP8 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Rab40bQ8VHP8 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rab40bQ8VHP8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Rab40bQ8VHP8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Rab40bQ8VHP8 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Gm4459-201ENSMUST00000118750 468 ntBASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Gm29518-201ENSMUST00000190858 372 ntBASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Rab40bQ8VHP8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Gm15165-201ENSMUST00000118140 502 ntBASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Gm43767-201ENSMUST00000198933 381 ntBASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Rab40bQ8VHP8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
Rab40bQ8VHP8 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms