Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Gm42928-201ENSMUST00000197338 3339 ntBASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccdc9Q8VC31 Gm38355-201ENSMUST00000192514 1570 ntBASIC18■□□□□ 0.47
Ccdc9Q8VC31 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Gm44981-201ENSMUST00000205549 1943 ntBASIC18■□□□□ 0.47
Ccdc9Q8VC31 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Gm45638-201ENSMUST00000211507 2878 ntBASIC18■□□□□ 0.47
Ccdc9Q8VC31 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Gm17661-201ENSMUST00000170317 270 ntBASIC18■□□□□ 0.47
Ccdc9Q8VC31 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18■□□□□ 0.47
Ccdc9Q8VC31 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18■□□□□ 0.47
Ccdc9Q8VC31 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Gm37644-201ENSMUST00000192190 2270 ntBASIC18■□□□□ 0.47
Ccdc9Q8VC31 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Ccdc9Q8VC31 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Gm2420-202ENSMUST00000202224 2249 ntBASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Gm38027-201ENSMUST00000192315 235 ntBASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Gm44065-201ENSMUST00000203184 3527 ntBASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Gm43195-201ENSMUST00000200614 2332 ntBASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccdc9Q8VC31 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 AC117194.1-201ENSMUST00000224847 3002 ntBASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.98■□□□□ 0.47
Ccdc9Q8VC31 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms