Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Gm44872-201ENSMUST00000207864 420 ntBASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Gm8242-201ENSMUST00000193029 1420 ntBASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh19Q80TF3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
Pcdh19Q80TF3 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Celf4-206ENSMUST00000224553 1729 ntBASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Gm6973-201ENSMUST00000117080 721 ntBASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Gm6018-201ENSMUST00000216090 1306 ntBASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh19Q80TF3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Gm10576-201ENSMUST00000191927 825 ntBASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh19Q80TF3 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms