Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Gm27618-201ENSMUST00000183671 60 ntBASIC12.9□□□□□ -0.34
Nkx3-1P97436 Mir6977-201ENSMUST00000184960 64 ntBASIC12.9□□□□□ -0.34
Nkx3-1P97436 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Gm5186-201ENSMUST00000218781 920 ntBASIC12.9□□□□□ -0.34
Nkx3-1P97436 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.9□□□□□ -0.34
Nkx3-1P97436 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Gm37812-201ENSMUST00000195216 2475 ntBASIC12.9□□□□□ -0.34
Nkx3-1P97436 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.9□□□□□ -0.34
Nkx3-1P97436 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Nkx3-1P97436 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx3-1P97436 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx3-1P97436 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.9□□□□□ -0.35
Nkx3-1P97436 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.9□□□□□ -0.35
Nkx3-1P97436 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Nkx3-1P97436 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Gm12428-201ENSMUST00000119844 727 ntBASIC12.89□□□□□ -0.35
Nkx3-1P97436 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Gm17837-201ENSMUST00000186435 985 ntBASIC12.89□□□□□ -0.35
Nkx3-1P97436 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.89□□□□□ -0.35
Nkx3-1P97436 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Nkx3-1P97436 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.88□□□□□ -0.35
Nkx3-1P97436 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.88□□□□□ -0.35
Nkx3-1P97436 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.88□□□□□ -0.35
Nkx3-1P97436 Gm8410-201ENSMUST00000117225 605 ntBASIC12.88□□□□□ -0.35
Nkx3-1P97436 Gm13223-201ENSMUST00000118609 747 ntBASIC12.88□□□□□ -0.35
Nkx3-1P97436 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.88□□□□□ -0.35
Nkx3-1P97436 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms