Protein–RNA interactions for Protein: P48759

Ptx3, Pentraxin-related protein PTX3, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptx3P48759 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptx3P48759 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptx3P48759 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Ptx3P48759 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Ptx3P48759 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptx3P48759 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptx3P48759 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Ptx3P48759 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Ptx3P48759 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptx3P48759 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Ptx3P48759 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ptx3P48759 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.87□□□□□ -0.19
Ptx3P48759 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ptx3P48759 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ptx3P48759 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Ptx3P48759 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Ptx3P48759 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.87□□□□□ -0.19
Ptx3P48759 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.87□□□□□ -0.19
Ptx3P48759 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC13.87□□□□□ -0.19
Ptx3P48759 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.87□□□□□ -0.19
Ptx3P48759 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Ptx3P48759 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ptx3P48759 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Ptx3P48759 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.87□□□□□ -0.19
Ptx3P48759 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Ptx3P48759 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ptx3P48759 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ptx3P48759 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC13.86□□□□□ -0.19
Ptx3P48759 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Gm11745-201ENSMUST00000121669 448 ntBASIC13.86□□□□□ -0.19
Ptx3P48759 Gm16026-204ENSMUST00000162652 683 ntBASIC13.86□□□□□ -0.19
Ptx3P48759 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ptx3P48759 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.86□□□□□ -0.19
Ptx3P48759 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ptx3P48759 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.86□□□□□ -0.19
Ptx3P48759 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ptx3P48759 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.86□□□□□ -0.19
Ptx3P48759 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ptx3P48759 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ptx3P48759 Gm15920-201ENSMUST00000118998 402 ntBASIC13.85□□□□□ -0.19
Ptx3P48759 Gm12017-201ENSMUST00000122453 1003 ntBASIC13.85□□□□□ -0.19
Ptx3P48759 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.85□□□□□ -0.19
Ptx3P48759 Gm44335-201ENSMUST00000196879 141 ntBASIC13.85□□□□□ -0.19
Ptx3P48759 Gm44297-201ENSMUST00000198304 141 ntBASIC13.85□□□□□ -0.19
Ptx3P48759 Gm44346-201ENSMUST00000198851 141 ntBASIC13.85□□□□□ -0.19
Ptx3P48759 Gm18057-201ENSMUST00000208220 503 ntBASIC13.85□□□□□ -0.19
Ptx3P48759 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC13.85□□□□□ -0.19
Ptx3P48759 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Ptx3P48759 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.85□□□□□ -0.19
Ptx3P48759 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ptx3P48759 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms