Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Gm12182-201ENSMUST00000118655 1008 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm13882-201ENSMUST00000120886 1002 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm10284-201ENSMUST00000145057 1005 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm10481-201ENSMUST00000179228 1002 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm2574-201ENSMUST00000181051 1002 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm3200-201ENSMUST00000181493 1002 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm8825-201ENSMUST00000182565 998 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm4518-201ENSMUST00000182638 718 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm8330-201ENSMUST00000182754 1008 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm4575-201ENSMUST00000182991 1002 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm8709-201ENSMUST00000183230 1012 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm29518-201ENSMUST00000190858 372 ntBASIC14.38□□□□□ -0.11
Prox1P48437 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Prox1P48437 Gm10293-201ENSMUST00000076317 1002 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Gm6316-201ENSMUST00000082064 1020 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Prox1P48437 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.38□□□□□ -0.11
Prox1P48437 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Prox1P48437 Gm13337-201ENSMUST00000119183 1594 ntBASIC14.38□□□□□ -0.11
Prox1P48437 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Prox1P48437 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Prox1P48437 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Prox1P48437 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14.37□□□□□ -0.11
Prox1P48437 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.37□□□□□ -0.11
Prox1P48437 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.37□□□□□ -0.11
Prox1P48437 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Prox1P48437 Rprl3-201ENSMUST00000157400 290 ntBASIC14.37□□□□□ -0.11
Prox1P48437 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Prox1P48437 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.37□□□□□ -0.11
Prox1P48437 Gm27741-201ENSMUST00000185060 237 ntBASIC14.37□□□□□ -0.11
Prox1P48437 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Gm30437-201ENSMUST00000206086 1201 ntBASIC14.37□□□□□ -0.11
Prox1P48437 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.37□□□□□ -0.11
Prox1P48437 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Prox1P48437 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.37□□□□□ -0.11
Prox1P48437 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Prox1P48437 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Prox1P48437 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Prox1P48437 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.36□□□□□ -0.11
Prox1P48437 Gm9103-201ENSMUST00000119371 405 ntBASIC14.36□□□□□ -0.11
Prox1P48437 Gm15794-201ENSMUST00000120182 631 ntBASIC14.36□□□□□ -0.11
Prox1P48437 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.36□□□□□ -0.11
Prox1P48437 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Prox1P48437 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.35□□□□□ -0.11
Prox1P48437 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Prox1P48437 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Prox1P48437 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms