Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC13.98□□□□□ -0.17
CD28P10747 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC13.98□□□□□ -0.17
CD28P10747 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 INTS4P1-201ENST00000438455 1935 ntBASIC13.98□□□□□ -0.17
CD28P10747 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
CD28P10747 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.98□□□□□ -0.17
CD28P10747 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.98□□□□□ -0.17
CD28P10747 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 FGFR3P6-201ENST00000457012 610 ntBASIC13.98□□□□□ -0.17
CD28P10747 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC13.98□□□□□ -0.17
CD28P10747 RNPS1P1-201ENST00000507437 918 ntBASIC13.98□□□□□ -0.17
CD28P10747 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.98□□□□□ -0.17
CD28P10747 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 AC073648.2-201ENST00000510116 352 ntBASIC13.98□□□□□ -0.17
CD28P10747 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.98□□□□□ -0.17
CD28P10747 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.98□□□□□ -0.17
CD28P10747 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.98□□□□□ -0.17
CD28P10747 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC13.98□□□□□ -0.17
CD28P10747 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
CD28P10747 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.98□□□□□ -0.17
CD28P10747 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CD28P10747 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.98□□□□□ -0.17
CD28P10747 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
CD28P10747 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CD28P10747 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD28P10747 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CD28P10747 GMCL1P1-201ENST00000463439 1581 ntBASIC13.97□□□□□ -0.17
CD28P10747 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CD28P10747 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.97□□□□□ -0.17
CD28P10747 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.97□□□□□ -0.17
CD28P10747 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CD28P10747 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.97□□□□□ -0.17
CD28P10747 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD28P10747 AC093909.1-201ENST00000504731 1122 ntBASIC13.97□□□□□ -0.17
CD28P10747 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.97□□□□□ -0.17
CD28P10747 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD28P10747 AC112698.1-201ENST00000510299 916 ntBASIC13.97□□□□□ -0.17
CD28P10747 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.97□□□□□ -0.17
CD28P10747 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.97□□□□□ -0.17
CD28P10747 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.97□□□□□ -0.17
CD28P10747 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.97□□□□□ -0.17
CD28P10747 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 AC011467.2-201ENST00000598425 242 ntBASIC13.97□□□□□ -0.17
CD28P10747 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD28P10747 AC023511.2-201ENST00000618803 211 ntBASIC13.97□□□□□ -0.17
CD28P10747 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD28P10747 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD28P10747 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC13.97□□□□□ -0.17
CD28P10747 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CD28P10747 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CD28P10747 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.97□□□□□ -0.17
CD28P10747 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CD28P10747 PAN3-AS1-201ENST00000563843 1351 ntBASIC13.96□□□□□ -0.17
CD28P10747 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CD28P10747 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD28P10747 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CD28P10747 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC13.96□□□□□ -0.17
CD28P10747 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 RBM17P3-201ENST00000417687 1192 ntBASIC13.96□□□□□ -0.17
CD28P10747 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CD28P10747 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CD28P10747 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
CD28P10747 SCARNA2-201ENST00000458748 420 ntBASIC13.96□□□□□ -0.17
CD28P10747 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC13.96□□□□□ -0.17
CD28P10747 SLC25A1P1-201ENST00000528351 927 ntBASIC13.96□□□□□ -0.17
CD28P10747 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC13.96□□□□□ -0.17
CD28P10747 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.96□□□□□ -0.17
CD28P10747 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms