Protein–RNA interactions for Protein: O35638

Stag2, Cohesin subunit SA-2, mousemouse

Predictions only

Length 1,231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag2O35638 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Stag2O35638 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Stag2O35638 Mir6990-201ENSMUST00000183724 91 ntBASIC17.1■□□□□ 0.33
Stag2O35638 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
Stag2O35638 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Stag2O35638 CT025626.1-201ENSMUST00000223735 1455 ntBASIC17.1■□□□□ 0.33
Stag2O35638 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.1■□□□□ 0.33
Stag2O35638 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Stag2O35638 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.09■□□□□ 0.33
Stag2O35638 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Stag2O35638 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.09■□□□□ 0.33
Stag2O35638 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.09■□□□□ 0.33
Stag2O35638 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC17.09■□□□□ 0.33
Stag2O35638 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC17.09■□□□□ 0.33
Stag2O35638 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Stag2O35638 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.09■□□□□ 0.33
Stag2O35638 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.09■□□□□ 0.33
Stag2O35638 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Stag2O35638 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Stag2O35638 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stag2O35638 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Stag2O35638 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Stag2O35638 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stag2O35638 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Stag2O35638 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Stag2O35638 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.08■□□□□ 0.33
Stag2O35638 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Stag2O35638 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Stag2O35638 Gm12017-201ENSMUST00000122453 1003 ntBASIC17.08■□□□□ 0.32
Stag2O35638 Gm43474-201ENSMUST00000196415 774 ntBASIC17.08■□□□□ 0.32
Stag2O35638 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.08■□□□□ 0.32
Stag2O35638 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
Stag2O35638 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stag2O35638 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Stag2O35638 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
Stag2O35638 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC17.08■□□□□ 0.32
Stag2O35638 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Stag2O35638 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Stag2O35638 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Stag2O35638 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.07■□□□□ 0.32
Stag2O35638 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 AC164565.1-201ENSMUST00000217520 1484 ntBASIC17.07■□□□□ 0.32
Stag2O35638 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC17.07■□□□□ 0.32
Stag2O35638 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.07■□□□□ 0.32
Stag2O35638 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Stag2O35638 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.07■□□□□ 0.32
Stag2O35638 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Stag2O35638 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Stag2O35638 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms