Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Gm27920-201ENSMUST00000183953 96 ntBASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Pcdhb9E9Q5G2 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Gm13464-201ENSMUST00000119418 935 ntBASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Gm11543-201ENSMUST00000120758 370 ntBASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Pcdhb9E9Q5G2 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Gm8749-201ENSMUST00000117737 331 ntBASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Gm2810-201ENSMUST00000118681 990 ntBASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Gm43125-201ENSMUST00000201724 730 ntBASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.54■□□□□ 0.4
Pcdhb9E9Q5G2 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Efs-202ENSMUST00000227037 2540 ntBASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Pcdhb9E9Q5G2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb9E9Q5G2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms