Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trav12d-1A0N8R0 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Gm8097-201ENSMUST00000117903 829 ntBASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav12d-1A0N8R0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-1A0N8R0 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-1A0N8R0 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav12d-1A0N8R0 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Trav12d-1A0N8R0 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-1A0N8R0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trav12d-1A0N8R0 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-1A0N8R0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-1A0N8R0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-1A0N8R0 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12d-1A0N8R0 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Gm10499-201ENSMUST00000174094 934 ntBASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Gm6659-201ENSMUST00000174752 547 ntBASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 AC121577.1-201ENSMUST00000227302 707 ntBASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12d-1A0N8R0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms