Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ATXN3LQ9H3M9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 AC007613.1-201ENST00000572811 2597 ntBASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 AC011467.2-201ENST00000598425 242 ntBASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 AP001269.4-201ENST00000609611 512 ntBASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.78■□□□□ 0.6
ATXN3LQ9H3M9 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 RBM17P3-201ENST00000417687 1192 ntBASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 AC073648.2-201ENST00000510116 352 ntBASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 RNA5SP419-201ENST00000515908 135 ntBASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ATXN3LQ9H3M9 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATXN3LQ9H3M9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATXN3LQ9H3M9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ATXN3LQ9H3M9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ATXN3LQ9H3M9 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
ATXN3LQ9H3M9 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ATXN3LQ9H3M9 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.77■□□□□ 0.59
ATXN3LQ9H3M9 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
ATXN3LQ9H3M9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.77■□□□□ 0.59
ATXN3LQ9H3M9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
ATXN3LQ9H3M9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 FGFR3P6-201ENST00000457012 610 ntBASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 SCARNA2-201ENST00000458748 420 ntBASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 AC093909.1-201ENST00000504731 1122 ntBASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 RNPS1P1-201ENST00000507437 918 ntBASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 CALM1-205ENST00000553542 877 ntTSL 5 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ATXN3LQ9H3M9 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms