Protein–RNA interactions for Protein: Q80U87

Usp8, Ubiquitin carboxyl-terminal hydrolase 8, mousemouse

Predictions only

Length 1,080 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp8Q80U87 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.06■□□□□ 0
Usp8Q80U87 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC15.06■□□□□ 0
Usp8Q80U87 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp8Q80U87 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.06■□□□□ 0
Usp8Q80U87 Ank2-226ENSMUST00000189368 339 ntBASIC15.06■□□□□ 0
Usp8Q80U87 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC15.06■□□□□ 0
Usp8Q80U87 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp8Q80U87 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Usp8Q80U87 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC15.06■□□□□ 0
Usp8Q80U87 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp8Q80U87 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC15.06■□□□□ 0
Usp8Q80U87 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC15.06■□□□□ 0
Usp8Q80U87 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Usp8Q80U87 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp8Q80U87 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.06■□□□□ 0
Usp8Q80U87 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp8Q80U87 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Usp8Q80U87 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Usp8Q80U87 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Usp8Q80U87 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Usp8Q80U87 Pcgf5-211ENSMUST00000225920 6443 ntBASIC15.05■□□□□ 0
Usp8Q80U87 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.05■□□□□ 0
Usp8Q80U87 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
Usp8Q80U87 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC15.05■□□□□ 0
Usp8Q80U87 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Usp8Q80U87 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Usp8Q80U87 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.05■□□□□ -0
Usp8Q80U87 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
Usp8Q80U87 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.05■□□□□ -0
Usp8Q80U87 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC15.05■□□□□ -0
Usp8Q80U87 Gm13830-205ENSMUST00000201195 1155 ntBASIC15.05■□□□□ -0
Usp8Q80U87 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC15.05■□□□□ -0
Usp8Q80U87 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Usp8Q80U87 Rbfox2-207ENSMUST00000227533 1041 ntBASIC15.05■□□□□ -0
Usp8Q80U87 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Usp8Q80U87 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Usp8Q80U87 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC15.05■□□□□ -0
Usp8Q80U87 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC15.05■□□□□ -0
Usp8Q80U87 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Usp8Q80U87 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.04■□□□□ -0
Usp8Q80U87 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.04■□□□□ -0
Usp8Q80U87 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.04■□□□□ -0
Usp8Q80U87 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Gm7556-201ENSMUST00000201178 1084 ntBASIC15.04■□□□□ -0
Usp8Q80U87 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC15.04■□□□□ -0
Usp8Q80U87 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 AC093926.2-201ENSMUST00000214468 1228 ntBASIC15.04■□□□□ -0
Usp8Q80U87 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.04■□□□□ -0
Usp8Q80U87 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp8Q80U87 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC15.03■□□□□ -0
Usp8Q80U87 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.03■□□□□ -0
Usp8Q80U87 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp8Q80U87 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp8Q80U87 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp8Q80U87 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Usp8Q80U87 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp8Q80U87 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp8Q80U87 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Usp8Q80U87 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC15.03■□□□□ -0
Usp8Q80U87 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp8Q80U87 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC15.03■□□□□ -0
Usp8Q80U87 Gm15358-201ENSMUST00000119249 520 ntBASIC15.03■□□□□ -0
Usp8Q80U87 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.03■□□□□ -0
Usp8Q80U87 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.03■□□□□ -0
Usp8Q80U87 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.03■□□□□ -0
Usp8Q80U87 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC15.03■□□□□ -0
Usp8Q80U87 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.03■□□□□ -0
Usp8Q80U87 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Usp8Q80U87 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms