Protein–RNA interactions for Protein: P15975

Usp53, Inactive ubiquitin carboxyl-terminal hydrolase 53, mousemouse

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp53P15975 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
Usp53P15975 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.31■□□□□ 0.36
Usp53P15975 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Usp53P15975 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp53P15975 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC17.3■□□□□ 0.36
Usp53P15975 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp53P15975 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Usp53P15975 Gm13616-201ENSMUST00000120600 222 ntBASIC17.3■□□□□ 0.36
Usp53P15975 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC17.3■□□□□ 0.36
Usp53P15975 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Usp53P15975 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
Usp53P15975 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Usp53P15975 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Usp53P15975 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Usp53P15975 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp53P15975 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Usp53P15975 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.29■□□□□ 0.36
Usp53P15975 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC17.29■□□□□ 0.36
Usp53P15975 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.29■□□□□ 0.36
Usp53P15975 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Usp53P15975 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.29■□□□□ 0.36
Usp53P15975 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Usp53P15975 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Gm13233-201ENSMUST00000118760 1443 ntBASIC17.29■□□□□ 0.36
Usp53P15975 Gm13244-201ENSMUST00000118855 1446 ntBASIC17.29■□□□□ 0.36
Usp53P15975 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Usp53P15975 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Usp53P15975 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Usp53P15975 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Usp53P15975 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Usp53P15975 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Gm25948-201ENSMUST00000175334 112 ntBASIC17.28■□□□□ 0.36
Usp53P15975 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC17.28■□□□□ 0.36
Usp53P15975 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp53P15975 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp53P15975 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC17.28■□□□□ 0.36
Usp53P15975 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.28■□□□□ 0.36
Usp53P15975 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.28■□□□□ 0.36
Usp53P15975 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
Usp53P15975 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Usp53P15975 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Gm14026-201ENSMUST00000120625 1789 ntBASIC17.28■□□□□ 0.36
Usp53P15975 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Usp53P15975 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms