Protein–RNA interactions for Protein: O88351

Ikbkb, Inhibitor of nuclear factor kappa-B kinase subunit beta, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IkbkbO88351 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.57■□□□□ 0.24
IkbkbO88351 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.57■□□□□ 0.24
IkbkbO88351 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.57■□□□□ 0.24
IkbkbO88351 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
IkbkbO88351 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.57■□□□□ 0.24
IkbkbO88351 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
IkbkbO88351 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
IkbkbO88351 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
IkbkbO88351 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC16.56■□□□□ 0.24
IkbkbO88351 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.56■□□□□ 0.24
IkbkbO88351 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
IkbkbO88351 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.56■□□□□ 0.24
IkbkbO88351 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.56■□□□□ 0.24
IkbkbO88351 Gm7229-201ENSMUST00000214719 1007 ntBASIC16.56■□□□□ 0.24
IkbkbO88351 CT943659.1-201ENSMUST00000215459 326 ntBASIC16.56■□□□□ 0.24
IkbkbO88351 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.56■□□□□ 0.24
IkbkbO88351 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
IkbkbO88351 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Gm5357-201ENSMUST00000212720 1924 ntBASIC16.56■□□□□ 0.24
IkbkbO88351 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
IkbkbO88351 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
IkbkbO88351 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
IkbkbO88351 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
IkbkbO88351 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.55■□□□□ 0.24
IkbkbO88351 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.55■□□□□ 0.24
IkbkbO88351 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.55■□□□□ 0.24
IkbkbO88351 Mir3113-201ENSMUST00000175478 76 ntBASIC16.55■□□□□ 0.24
IkbkbO88351 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC16.55■□□□□ 0.24
IkbkbO88351 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
IkbkbO88351 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.55■□□□□ 0.24
IkbkbO88351 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
IkbkbO88351 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
IkbkbO88351 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
IkbkbO88351 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.55■□□□□ 0.24
IkbkbO88351 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
IkbkbO88351 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Gm14722-201ENSMUST00000118943 689 ntBASIC16.54■□□□□ 0.24
IkbkbO88351 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC16.54■□□□□ 0.24
IkbkbO88351 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC16.54■□□□□ 0.24
IkbkbO88351 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Gm10175-201ENSMUST00000086013 645 ntBASIC16.54■□□□□ 0.24
IkbkbO88351 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
IkbkbO88351 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
IkbkbO88351 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
IkbkbO88351 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
IkbkbO88351 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms