Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
PRKNO60260 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.67■□□□□ 0.26
PRKNO60260 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.67■□□□□ 0.26
PRKNO60260 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.67■□□□□ 0.26
PRKNO60260 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.67■□□□□ 0.26
PRKNO60260 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 AC005336.2-201ENST00000593183 939 ntBASIC16.67■□□□□ 0.26
PRKNO60260 Z69720.1-201ENST00000601483 472 ntBASIC16.67■□□□□ 0.26
PRKNO60260 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PRKNO60260 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PRKNO60260 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
PRKNO60260 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.67■□□□□ 0.26
PRKNO60260 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PRKNO60260 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
PRKNO60260 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.67■□□□□ 0.26
PRKNO60260 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
PRKNO60260 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
PRKNO60260 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
PRKNO60260 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 HCG11-201ENST00000411553 5696 ntBASIC16.66■□□□□ 0.26
PRKNO60260 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PRKNO60260 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.66■□□□□ 0.26
PRKNO60260 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PRKNO60260 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.66■□□□□ 0.26
PRKNO60260 AC104819.1-201ENST00000504587 486 ntBASIC16.66■□□□□ 0.26
PRKNO60260 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.66■□□□□ 0.26
PRKNO60260 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.66■□□□□ 0.26
PRKNO60260 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.66■□□□□ 0.26
PRKNO60260 KRT126P-201ENST00000549467 1181 ntBASIC16.66■□□□□ 0.26
PRKNO60260 PRELID1P1-202ENST00000567272 903 ntBASIC16.66■□□□□ 0.26
PRKNO60260 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.66■□□□□ 0.26
PRKNO60260 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.66■□□□□ 0.26
PRKNO60260 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.66■□□□□ 0.26
PRKNO60260 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.66■□□□□ 0.26
PRKNO60260 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.66■□□□□ 0.26
PRKNO60260 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PRKNO60260 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PRKNO60260 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.66■□□□□ 0.26
PRKNO60260 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
PRKNO60260 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.66■□□□□ 0.26
PRKNO60260 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.66■□□□□ 0.26
PRKNO60260 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PRKNO60260 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 NSUN5P1-202ENST00000421140 1535 ntBASIC16.65■□□□□ 0.26
PRKNO60260 NSUN5P2-203ENST00000457352 1529 ntBASIC16.65■□□□□ 0.26
PRKNO60260 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRKNO60260 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRKNO60260 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKNO60260 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKNO60260 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PRKNO60260 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PRKNO60260 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKNO60260 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PRKNO60260 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRKNO60260 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PRKNO60260 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PRKNO60260 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKNO60260 AC246785.2-201ENST00000432512 513 ntBASIC16.65■□□□□ 0.26
PRKNO60260 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.65■□□□□ 0.26
PRKNO60260 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms