Protein–RNA interactions for Protein: Q9WVL1

Ap4s1, AP-4 complex subunit sigma-1, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap4s1Q9WVL1 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ap4s1Q9WVL1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Gm37019-201ENSMUST00000192133 2134 ntBASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.39□□□□□ -0.11
Ap4s1Q9WVL1 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Gm13559-201ENSMUST00000120476 863 ntBASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Gm8349-201ENSMUST00000182720 1003 ntBASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Celf4-206ENSMUST00000224553 1729 ntBASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ap4s1Q9WVL1 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ap4s1Q9WVL1 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ap4s1Q9WVL1 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap4s1Q9WVL1 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ap4s1Q9WVL1 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 87.8 ms