Protein–RNA interactions for Protein: Q9UHP3

USP25, Ubiquitin carboxyl-terminal hydrolase 25, humanhuman

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP25Q9UHP3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
USP25Q9UHP3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP25Q9UHP3 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.58■□□□□ 0.88
USP25Q9UHP3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
USP25Q9UHP3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP25Q9UHP3 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP25Q9UHP3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.58■□□□□ 0.88
USP25Q9UHP3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP25Q9UHP3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
USP25Q9UHP3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.58■□□□□ 0.88
USP25Q9UHP3 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 AC008894.3-201ENST00000624324 3103 ntBASIC20.57■□□□□ 0.88
USP25Q9UHP3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
USP25Q9UHP3 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
USP25Q9UHP3 AC093010.1-201ENST00000473625 1624 ntBASIC20.56■□□□□ 0.88
USP25Q9UHP3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP25Q9UHP3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
USP25Q9UHP3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP25Q9UHP3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP25Q9UHP3 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP25Q9UHP3 AL023806.1-201ENST00000603994 1649 ntBASIC20.56■□□□□ 0.88
USP25Q9UHP3 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP25Q9UHP3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
USP25Q9UHP3 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC20.56■□□□□ 0.88
USP25Q9UHP3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC20.55■□□□□ 0.88
USP25Q9UHP3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
USP25Q9UHP3 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.55■□□□□ 0.88
USP25Q9UHP3 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.55■□□□□ 0.88
USP25Q9UHP3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC20.55■□□□□ 0.88
USP25Q9UHP3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC20.55■□□□□ 0.88
USP25Q9UHP3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 MIR4497-201ENST00000583208 89 ntBASIC20.55■□□□□ 0.88
USP25Q9UHP3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
USP25Q9UHP3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 OR6D1P-202ENST00000641007 5290 ntBASIC20.55■□□□□ 0.88
USP25Q9UHP3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
USP25Q9UHP3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.54■□□□□ 0.88
USP25Q9UHP3 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.54■□□□□ 0.88
USP25Q9UHP3 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
USP25Q9UHP3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 LINC00602-201ENST00000629776 2065 ntBASIC20.54■□□□□ 0.88
USP25Q9UHP3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
USP25Q9UHP3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms