Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC18.05■□□□□ 0.48
TTC28Q96AY4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TTC28Q96AY4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC28Q96AY4 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TTC28Q96AY4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.05■□□□□ 0.48
TTC28Q96AY4 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC28Q96AY4 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TTC28Q96AY4 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TTC28Q96AY4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TTC28Q96AY4 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC28Q96AY4 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
TTC28Q96AY4 KLF4P1-201ENST00000412782 1185 ntBASIC18.05■□□□□ 0.48
TTC28Q96AY4 AL355306.1-201ENST00000415580 579 ntBASIC18.05■□□□□ 0.48
TTC28Q96AY4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TTC28Q96AY4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TTC28Q96AY4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
TTC28Q96AY4 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TTC28Q96AY4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC28Q96AY4 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC28Q96AY4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 KRT8P23-201ENST00000560090 1207 ntBASIC18.04■□□□□ 0.48
TTC28Q96AY4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 AC022144.1-201ENST00000602255 1580 ntBASIC18.04■□□□□ 0.48
TTC28Q96AY4 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC28Q96AY4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC28Q96AY4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TTC28Q96AY4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.04■□□□□ 0.48
TTC28Q96AY4 AC026150.2-201ENST00000564693 1156 ntBASIC18.04■□□□□ 0.48
TTC28Q96AY4 TMEM261P1-201ENST00000604899 340 ntBASIC18.04■□□□□ 0.48
TTC28Q96AY4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TTC28Q96AY4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC28Q96AY4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC28Q96AY4 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC28Q96AY4 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC28Q96AY4 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 ACTBP11-201ENST00000436287 1126 ntBASIC18.03■□□□□ 0.48
TTC28Q96AY4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 MTMR9LP-203ENST00000426597 1545 ntBASIC18.03■□□□□ 0.48
TTC28Q96AY4 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 REXO1L6P-201ENST00000603433 1515 ntBASIC18.03■□□□□ 0.48
TTC28Q96AY4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC28Q96AY4 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC28Q96AY4 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TTC28Q96AY4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC28Q96AY4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 IGHV3OR16-16-201ENST00000563644 343 ntBASIC18.03■□□□□ 0.48
TTC28Q96AY4 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.03■□□□□ 0.48
TTC28Q96AY4 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TTC28Q96AY4 AD001527.2-201ENST00000622994 785 ntBASIC18.03■□□□□ 0.48
TTC28Q96AY4 SDHAP2-201ENST00000455183 2001 ntBASIC18.02■□□□□ 0.48
TTC28Q96AY4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC28Q96AY4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC28Q96AY4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC18.02■□□□□ 0.48
TTC28Q96AY4 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.02■□□□□ 0.48
TTC28Q96AY4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC28Q96AY4 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.02■□□□□ 0.48
TTC28Q96AY4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.02■□□□□ 0.48
TTC28Q96AY4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC18.02■□□□□ 0.48
TTC28Q96AY4 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
TTC28Q96AY4 COG4-212ENST00000564653 590 ntTSL 5 BASIC18.02■□□□□ 0.48
TTC28Q96AY4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC28Q96AY4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.02■□□□□ 0.48
TTC28Q96AY4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
TTC28Q96AY4 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC18.02■□□□□ 0.47
TTC28Q96AY4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.02■□□□□ 0.47
TTC28Q96AY4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.02■□□□□ 0.47
TTC28Q96AY4 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TTC28Q96AY4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
TTC28Q96AY4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.02■□□□□ 0.47
TTC28Q96AY4 SPDYE14P-201ENST00000442619 822 ntBASIC18.01■□□□□ 0.47
TTC28Q96AY4 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.01■□□□□ 0.47
TTC28Q96AY4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC18.01■□□□□ 0.47
TTC28Q96AY4 AC243562.1-201ENST00000560672 389 ntBASIC18.01■□□□□ 0.47
TTC28Q96AY4 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.01■□□□□ 0.47
TTC28Q96AY4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
TTC28Q96AY4 GNAS-203ENST00000306120 1878 ntBASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms