Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Gtf3c5Q8R2T8 Gm42748-201ENSMUST00000199354 2341 ntBASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 AC154222.1-201ENSMUST00000223882 475 ntBASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Gtf3c5Q8R2T8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Dmp1-201ENSMUST00000066708 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Gm18206-201ENSMUST00000207027 926 ntBASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Gm42706-201ENSMUST00000199733 1910 ntBASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Gm13294-201ENSMUST00000121757 1330 ntBASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Gtf3c5Q8R2T8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Gm38318-201ENSMUST00000195769 1706 ntBASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Gm4899-201ENSMUST00000178708 719 ntBASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Gtf3c5Q8R2T8 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gtf3c5Q8R2T8 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gtf3c5Q8R2T8 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gtf3c5Q8R2T8 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
Gtf3c5Q8R2T8 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Gtf3c5Q8R2T8 Ntrk2-209ENSMUST00000225950 2640 ntBASIC17.64■□□□□ 0.41
Gtf3c5Q8R2T8 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf3c5Q8R2T8 Gm45293-201ENSMUST00000209754 1812 ntBASIC17.64■□□□□ 0.41
Gtf3c5Q8R2T8 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf3c5Q8R2T8 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Gtf3c5Q8R2T8 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 69.8 ms